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Biochemical Space

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Below is displayed the entity view of the selected entity. Entity view is shown in the form of scheme expressing relations part of (green), contains (orange), substrate of rule (red) and product of rule (blue). The navigation panel on the left shows the entity in corresponding model and allows you to browse the biological structure of the model. Manipulation with the navigation panel is realized by unfolding the items in the navigation tree and clicking on a requested system level.

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Relations Tab contains information about relations in which selected entity figures. There are several types of relations: part of, contains, partial composition items and full composition items. This tab also contains organism info which is optional.

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Rules tab contains list of rules which contains selected entity.

Processes Tab
This tab contains set of processes in which selected entity is present.

complex of circadian clock proteins KaiA and KaiB and KaiC [KaiA4B6C6]

Intermediate complex form during the dephosphorylation phase of the circadian clock protein KaiC. KaiB inside the complex is not a hexamer.

Part of:

Definition in BCS:

KaiC.KaiC.KaiC.KaiC.KaiC.KaiC.KaiB.KaiB.KaiB.KaiB.KaiB.KaiB.KaiA.KaiA.KaiA.KaiA
KaiC molecule is phosphorylated/dephosphorylated on serine amino acid in KaiC hexamer.
Original rule: S{u}::KaiC::?X::cyt <=> S{p}::KaiC::?X::cyt ; ?X = {KaiC6, KaiA2C6, KaiA4C6, KaiB6C6, KaiA4B6C6, KaiA6B6C6}

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Details
KaiC molecule is phosphorylated/dephosphorylated on threonine amino acid in KaiC hexamer.
Original rule: T{u}::KaiC::?X::cyt <=> T{p}::KaiC::?X::cyt ; ?X = {KaiC6, KaiA2C6, KaiA4C6, KaiB6C6, KaiA4B6C6, KaiA6B6C6}

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Details
Formation of complex from six KaiB molecules and KaiA4C6 complex and its dissociation.
Rule:
Details
Formation of complex from KaiA2 dimer and KaiA4B6C6 complex and its dissociation.
Rule:
Details