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In case of series of experiments, these can be found below in List of experiments with links
| Series name: | Figure 6 Experimental data of Synechocystis sp. PCC 6803 cultivated in non-buffe |
|---|---|
| Summary: | measurements of dCO2 (full blue lines) and pH signals (full black lines) signals (left panels) for initial pH 6.5 (panel A), 7.3 (panel C), 7.7 (panel E), and 8.1 (panel G). Four biological replicates with qualitatively identical results for each condition were collected; data from one representative experiment are shown. Identification of the exchange rates qCO2 (dotted blue lines, right panels) and qHCO3- (dotted black lines, right panels), identified from the measured data involving data differentiation and the assumption of qH+ = qHCO3- is represented in right panels for initial pH 6.5 (panel B), 7.3 (panel D), 7.7 (panel F), and 8.1 (panel H). Positive values in the right panels indicate dCO2 or HCO3- excretion, negative values indicate dCO2 or HCO3- uptake. For further experimental details, see Section 2. |
| Inserted: | 2019-10-22 07:22:12 |
| Last update: | 2019-10-22 10:32:52 |
| Number of experiments: | 4 |
List of experiments
| Name | Started | Inserted | |
|---|---|---|---|
| Panel B | 2019-10-22 08:31:46 | ||
|
Panel A | 2019-10-22 07:37:55 | |
| Panel C | 2019-10-22 08:39:24 | ||
| Panel D | 2019-10-22 08:43:36 |
| Name: | Panel A |
|---|---|
| Device Type: | Photobioreactor-041 |
| Device Name: | DoAB-PBR01 |
| Device ID: | 72700001 |
| Name: | Panel A: dCO2 |
|---|---|
| Device Type: | PSI MS GAS-100 |
| Device Name: | MIMS Prototype |
| Device ID: | MIMS-001 |
pH (measured)| Code: | _ph |
|---|---|
| Number of values: | 613 |
| Related to: |
Müller et al. 2019: [H.+]
|
dCO2 (measured)| Code: | _dco2 |
|---|---|
| Number of values: | 274 |
| Related to: |
Müller et al. 2019: [CO2]
|
| From: | Panel A: dCO2 |
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Towards a quantitative assessment of inorganic carbon cycling in photosynthetic microorganisms
Complete version of the model will be available soon on newly rebuilt version of the webpage.
Model detail
Towards a quantitative assessment of inorganic carbon cycling in photosynthetic microorganisms
Complete version of the model will be available soon on newly rebuilt version of the webpage.
Model detail
M. Trojak, D. Safranek, J. Hrabec, J. Salagovic, F. Romanovska, J. Cerveny: E-Cyanobacterium.org: A Web-Based Platform for Systems Biology of Cyanobacteria. In: Computational Methods in Systems Biology, CMSB 2016, Vol. 9859 of LNCS, pp. 316-322. Springer, 2016. DOI